bio.std.hts.iontorrent.flowcall

Members

Enums

FlowGramTag

enum FlowGramTag

Tag where flow signal intensities are stored

Functions

flowCalls

auto flowCalls(short[] intensities, string flow_order, FlowGramTag tag)

Get flow calls from signal intensities and flow order.

multiplier

float multiplier(FlowGramTag tag)

Scale of intensity values

readFlowCalls

auto readFlowCalls(R read, string flow_order, string key_sequence, string tag)

Get read flow calls. Takes ZF tag and strandness into account.

Structs

FlowCall

struct FlowCall

Flow base call

ReadFlowCall

struct ReadFlowCall

Flow call associated with a read

ReadFlowCallRange

struct ReadFlowCallRange(S)

Undocumented in source.

• flowcall
• flowindex