BamRegion

Members

Functions

fullyLeftOf

bool fullyLeftOf(uint ref_id, uint position)

Undocumented in source. Be warned that the author may not have intended to support it.

fullyRightOf

bool fullyRightOf(uint ref_id, uint position)

Undocumented in source. Be warned that the author may not have intended to support it.

opCmp

int opCmp(BamRegion other)

Undocumented in source. Be warned that the author may not have intended to support it.

overlaps

bool overlaps(uint ref_id, uint position)

Undocumented in source. Be warned that the author may not have intended to support it.

Variables

end

uint end;

0-based rightmost coordinate (excluded)

ref_id

uint ref_id;

Reference ID in the BAM file

start

uint start;

0-based leftmost coordinate (included)

• BamRegion