BamWriter.this

Creates new BAM writer outputting to file or stream. Automatically writes BAM magic number (4 bytes).

this(contrib.undead.stream.Stream stream, int compression_level, std.parallelism.TaskPool task_pool, size_t buffer_size)
class BamWriter
this
(
contrib.undead.stream.Stream stream
,
int compression_level = -1
,
std.parallelism.TaskPool task_pool = std.parallelism.taskPool
,
size_t buffer_size = 0
)
this(string filename, int compression_level, std.parallelism.TaskPool task_pool)

Parameters

compression_level int: compression level, must be in range -1..9
task_pool std.parallelism.TaskPool: task pool to use for parallel compression
buffer_size size_t: size of BgzfOutputStream buffer

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bio std hts bam writer BamWriter constructors

this

functions