AbstractAlignmentValidator

Abstract class encapsulating visitation of SAM header elements.

abstract

class AbstractAlignmentValidator {

}

Members

onError bool onError(BamRead al, AlignmentError error): Implement those methods to define your own behaviour.
onError bool onError(string key, Value value, TagError error): Undocumented in source.
onError bool onError(BamRead al, CigarError error): Undocumented in source.
validate void validate(BamRead alignment): Start validation process.