PileupRead.query_offset

Returns number of bases consumed from the read sequence.
More concisely,

if current CIGAR operation is 'M', '=', or 'X', index of current read base in the read sequence
if current CIGAR operation is 'D' or 'N', index of read base after the deletion

(in both cases indices are 0-based)

struct PileupRead(Read = bio.std.hts.bam.read.EagerBamRead)

@property const

int

query_offset

()

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