IndexBuilder

struct IndexBuilder {

this(Stream output_stream, int number_of_references);

bool check_bins;

void put(BamReadBlock read);

void finish();

}

Constructors

this this(Stream output_stream, int number_of_references)

Members

Functions

finish void finish(): Closes the stream
put void put(BamReadBlock read): Add a read. The reads must be put in coordinate-sorted order.

Variables

check_bins bool check_bins;: Check that bins are correct.

Meta

Source

See Implementation

bio std hts bam bai indexing functions

createIndex

structs

IndexBuilder